LTR28 (DF0000480)

LTR28 (Long Terminal Repeat) for ERV1 endogenous retrovirus

Description

LTR of endogenous retroviruses related to MER4-int, MER41-int, MER57-int, and MER65-int. LTR28 elements share common fragments with MER52, MER61, MER61B, MER61C, LTR1 and LTR27.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 1020 positions long. The average length of non-redundant hits to the model is 582.3. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 218 13534 174 10028

External Database Links

  • Repbase : LTR28 [Requires Repbase registration]