LTR29 (DF0000483)

LTR29 (Long Terminal Repeat) for ERV1 endogenous retrovirus

Description

Putative LTR of retroelement related to the MER4/41/57/65-int group. LTR29 elements share common fragments with MER39B, MER39, and MER34. LTR29 has 4 bp TSD. Original orientation has been changed to agree with the internal sequence

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 622 positions long. The average length of non-redundant hits to the model is 355.2. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 538 8950 470 4864

External Database Links

  • Repbase : LTR29 [Requires Repbase registration]