Sequence
--------

UCSC Genome Browser assembly ID: danRer10
Sequencing/Assembly provider ID: Genome Reference Consortium Zebrafish Build 10
Assembly date: Sep. 2014
GenBank accession ID: GCA_000002035.3
NCBI Genome information: NCBI genome/50 (Danio rerio)
NCBI Assembly information: NCBI assembly/210611 (Genome Reference Consortium Zebrafish Build 10)
BioProject information: NCBI Bioproject: 13922

  wget http://hgdownload.soe.ucsc.edu/goldenPath/danRer10/bigZips/danRer10.2bit
  twoBitToFa danRer10.2bit dfamseq


Benchmark
---------

  Garlic-1.3 
    createFakeSequence.pl -v -m danRer7 -s 1409770109 --useBED --dir . -k 4 -o benchmark --no_repeats -l 6.04


Process Into Dfam
-----------------

  /home/roberthubley/dfam/branches/release_2.0/Scripts/update/make_dfamseq.pl -a danRer10 /var/lib/XfamProduction/Dfam/dfamseq/danRer10


Cytoband Data
-------------

wget http://hgdownload.soe.ucsc.edu/goldenPath/danRer10/database/cytoBandIdeo.txt.gz